miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|207503454|gb|FF357065.1|FF357065 CACAAATGAGCTGGTTTTACGTGACCTACCCGAAGAAGCCATTCTCTTGAAAGTCAACAATAAGATTCCGGGACTTGGGC
TCCAGTTGGATGCTTCAGAGCTCAACCTACTTTACAGGGATAGGTACGACGTTGAAGTTCCAGATTCATATGAGCATCTT
CTTTTGGATGTTCTAGATGGCGATAGTCATCTGTTCATGCACAGTGACGAATTAGCTGCTGCATGGAGCGTATTGGCACC
TATACTCCATGAGATCGACCAGAAGAGGGTTGCTCCTGAGCTCTACGAGGCTGGGGATAAAGGACCAATTAATGCTTACT
ATCTCGCAGCTAAACATGGAGTCCGATGGGATGATGGCTGCTGAGCTGATACTTGGGAGCTGCTCAATGTATTTCGCTTC
CTTCTCTCTGTGTAGCAAAATCTGTTCGGTGAACTAAAACAAGAAATGGAGAAAAAAGGTATTTCTTGCTTGTTGATTCA
AACCCTTCGAAGGTGGATCAAAGCCACTATTACTGACCGAGCTGATATGTTGCACCCGACAATGAGGATGGAGGCGAGCA
TTGAGCGAGTCGTGTGGGGTGACTTGTGTAAATTGGACCTTAGTACTCCCTCCGTCCGAAAAAGATTGTCTCTCAAATGG
ATGTATCTAGCACCAAGTTAGTGCTAGATACATCCATTTGAGGCACAAGCTTGGGACAAGCTTTTTCGGACGGAGGGAGT
ATGTGCTAATAGTTGCAAACATCTTATGGAAATGTCTCGGTGTCATGTTAAAAAAAA




Most similar to sp|Q93ZW0|G6PD4_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q93ZW0|G6PD4_ARATH Glucose-6-phosphate 1-dehydrogenase 4,
           chloroplastic OS=Arabidopsis thaliana GN=At1g09420 PE=2
           SV=1
          Length = 625

 Score =  189 bits (479), Expect = 2e-47
 Identities = 86/118 (72%), Positives = 103/118 (87%)
 Frame = +2

Query: 2   TNELVLRDLPEEAILLKVNNKIPGLGLQLDASELNLLYRDRYDVEVPDSYEHLLLDVLDG 181
           TNEL+LRD P+EAIL+K+NNK+PGLGLQLDASELNLLY+DRY  EVPDSYEHL+ DV+DG
Sbjct: 507 TNELILRDEPDEAILVKINNKVPGLGLQLDASELNLLYKDRYKTEVPDSYEHLIHDVIDG 566

Query: 182 DSHLFMHSDELAAAWSVLAPILHEIDQKRVAPELYEAGDKGPINAYYLAAKHGVRWDD 355
           D+HLFM SDE+AAAW++L+P+L EID+   APELYE G +GP+ AYYL AKHGV W D
Sbjct: 567 DNHLFMRSDEVAAAWNILSPVLEEIDKHHTAPELYEFGGRGPVAAYYLWAKHGVPWAD 624